Scflow github
WebMay 1, 2024 · Background RNA sequencing (RNA-seq) is a common and widespread biological assay, and an increasing amount of data is generated with it. In practice, there … WebThe GitHub flow is a workflow designed to work well with Git and GitHub. It focuses on branching and makes it possible for teams to experiment freely, and make deployments …
Scflow github
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Webwrite_data: Generate scFlowExample dataset for scFlow and nf-core-scflow; write_scflow_manifest: Write Manifest file to be run by scFlow and nf-core-scflow; ... … WebAug 16, 2024 · The scFlow single-cell analysis pipeline [28] was employed for analysis of the Gerrits et al. data set. In brief, quality control was performed using the same criteria as …
WebDec 19, 2024 · In combiz/scFlow: A Single-Cell/Nuclei Analysis Toolkit. scFlow - Single-Cell Workflow. The scFlow R package provides the analytical back-end to the nf-core/scflow Nextflow pipeline for the orchestration of automated, scalable, and reproducible single-cell RNA sequencing analyses. The scFlow R package is built to enable standardized … WebJun 24, 2024 · As a bio-inspired sensor with high temporal resolution, the spiking camera has an enormous potential in real applications, especially for motion estimation in high-speed scenes. However, frame-based and event-based methods are not well suited to spike streams from the spiking camera due to the different data modalities. To this end, we …
WebThe preferred method for installation is through conda. Currently this installation is still in working progress. Preferably the installation should be in a separate environment.: # The conda environment is currently not ready but we are working on this #conda create -n scflow -c cgat scflow #conda activate scflow #scflow --help. WebAug 25, 2024 · nf-core/scflow is a bioinformatics pipeline for scalable, reproducible, best-practice analyses of single-cell/nuclei RNA-sequencing data. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. Full case/control sc/sn-RNAseq analyses can be orchestrated with a …
WebMar 23, 2024 · Function & Responsibilities As acoustic QA engineer, you will be responsible of the quality of the new features developed in Actran. Please watch the short intro video on Actran here. Based on strong engineering skills, the candidate will create the test plan and carry the testing of new advanced features on surrogate industrial models. Your ...
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